Differential gene expression analysis by cDNA-AFLP between flower buds of Phalaenopsis Hsiang Fei cv. H. F. and its somaclonal variant (Record no. 45889)

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control field MX-MdCICY
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20250625140655.0
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Transcribing agency CICY
090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN)
Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) B-11673
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Title Differential gene expression analysis by cDNA-AFLP between flower buds of Phalaenopsis Hsiang Fei cv. H. F. and its somaclonal variant
490 0# - SERIES STATEMENT
Volume/sequential designation Plant Science, 175(3), p.415-422, 2008
520 3# - SUMMARY, ETC.
Summary, etc. Somaclonal variation occurs during plant tissue culture and introduces changes that can result in the development of desirable traits. Using cDNA-amplified restriction fragment length polymorphism (cDNA-AFLP)analysis, we compared gene expression patterns between flower buds from wild type (donor)plants of Phalaenopsis Hsiang Fei cv. H. F., whose flowers are bronze in color, and from its somaclonal variants, whose flowers have a mosaic yellowish color, and sometimes an aberrant shape. Using 128 fluorescently labeled primer sets, a total of 2269 transcript-derived fragments (TDFs)were analyzed. Among them, 25 TDFs were differentially expressed between the wild type plant and its variant. After cloning and sequencing these differentially expressed TDFs, we found that they contained 27 distinct sequences. Further confirmation of the differential expression of these sequences was carried out by using semi-quantitative RT-PCR. We found that five sequences showed higher expression levels in the wild type plant compared to those in the variant plant. These corresponded to sequences that encoded casein kinase, isocitrate dehydrogenase, cytochrome P450, EMF2, and a no hits found protein. In contrast, two other sequences, whose roles were unknown, were expressed to a higher level in the variant plant compared to those in the wild type plant. The differential expression of these genes may lead to the mosaic color patterns as well as the aberrant flower shapes in the somaclonal variants of Phalaenopsis Hsiang Fei cv. H. F.
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element CDNA-AFLP
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element PHALAENOPSIS ORCHID
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element SEMI-QUANTITATIVE RT-PCR
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element SOMACLONAL VARIANT
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element TRANSCRIPT-DERIVED FRAGMENT (TDF)
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Hsu, T.
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Tsai, W.
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Wang, D.
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Lin, S.
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Hsiao, T.
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Chen, W.
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Chen, H.
856 40 - ELECTRONIC LOCATION AND ACCESS
Uniform Resource Identifier <a href="https://drive.google.com/file/d/1gUYk7toYucoOr7pELE0cO-Peyk1Dbf3B/view?usp=drivesdk">https://drive.google.com/file/d/1gUYk7toYucoOr7pELE0cO-Peyk1Dbf3B/view?usp=drivesdk</a>
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Source of classification or shelving scheme Clasificación local
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  Clasificación local     Ref1 CICY CICY Documento préstamo interbibliotecario 25.06.2025   B-11673 25.06.2025 25.06.2025 Documentos solicitados