MARC details
| 000 -LEADER |
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| fixed length control field |
02149nam a2200301Ia 4500 |
| 003 - CONTROL NUMBER IDENTIFIER |
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| control field |
MX-MdCICY |
| 005 - DATE AND TIME OF LATEST TRANSACTION |
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| control field |
20250625160220.0 |
| 040 ## - CATALOGING SOURCE |
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| Transcribing agency |
CICY |
| 090 ## - LOCALLY ASSIGNED LC-TYPE CALL NUMBER (OCLC); LOCAL CALL NUMBER (RLIN) |
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| Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) |
B-17957 |
| 008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION |
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| fixed length control field |
250602s9999 xx |||||s2 |||| ||und|d |
| 245 10 - TITLE STATEMENT |
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| Title |
An integrated analysis of mRNA and sRNA transcriptional profiles in Coffea arabica L. roots: insights on nitrogen starvation responses |
| 490 0# - SERIES STATEMENT |
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| Volume/sequential designation |
Functional & integrative genomics, 19(1), p.151-169, 2019 |
| 520 3# - SUMMARY, ETC. |
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| Summary, etc. |
Coffea arabica L. is an important agricultural commodity, accounting for 60 per cent of traded coffee worldwide. Nitrogen (N)is a macronutrient that is usually limiting to plant yield; however, molecular mechanisms of plant acclimation to N limitation remain largely unknown in tropical woody crops. In this study, we investigated the transcriptome of coffee roots under N starvation, analyzing poly-A+ libraries and small RNAs. We also evaluated the concentration of selected amino acids and N-source preferences in roots. Ammonium was preferentially taken up over nitrate, and asparagine and glutamate were the most abundant amino acids observed in coffee roots. We obtained 34,654 assembled contigs by mRNA sequencing, and validated the transcriptional profile of 12 genes by RT-qPCR. Illumina small RNA sequencing yielded 8,524,332 non-redundant reads, resulting in the identification of 86 microRNA families targeting 253 genes. The transcriptional pattern of eight miRNA families was also validated. To our knowledge, this is the first catalog of differentially regulated amino acids, N sources, mRNAs, and sRNAs in Arabica coffee roots. |
| 650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM |
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| Topical term or geographic name entry element |
COFFEE |
| 650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM |
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| Topical term or geographic name entry element |
NITROGEN TRANSPORT |
| 650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM |
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| Topical term or geographic name entry element |
DIFFERENTIAL GENE EXPRESSION |
| 650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM |
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| Topical term or geographic name entry element |
RNA-SEQ |
| 650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM |
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| Topical term or geographic name entry element |
MICRORNA |
| 700 12 - ADDED ENTRY--PERSONAL NAME |
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| Personal name |
Dos Santos, T. B. |
| 700 12 - ADDED ENTRY--PERSONAL NAME |
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| Personal name |
Soares, J. D. |
| 700 12 - ADDED ENTRY--PERSONAL NAME |
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| Personal name |
Lima, J. E. |
| 700 12 - ADDED ENTRY--PERSONAL NAME |
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| Personal name |
Silva, J. C. |
| 700 12 - ADDED ENTRY--PERSONAL NAME |
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| Personal name |
Ivamoto, S. T. |
| 700 12 - ADDED ENTRY--PERSONAL NAME |
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| Personal name |
Baba, V. Y. |
| 700 12 - ADDED ENTRY--PERSONAL NAME |
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| Personal name |
Júnior, M. Y. N. |
| 856 40 - ELECTRONIC LOCATION AND ACCESS |
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| Uniform Resource Identifier |
<a href="https://drive.google.com/file/d/1aamkYKp-VzWphH85G90UagBkW79LSktv/view?usp=drivesdk">https://drive.google.com/file/d/1aamkYKp-VzWphH85G90UagBkW79LSktv/view?usp=drivesdk</a> |
| Public note |
Para ver el documento ingresa a Google con tu cuenta: @cicy.edu.mx |
| 942 ## - ADDED ENTRY ELEMENTS (KOHA) |
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| Source of classification or shelving scheme |
Clasificación local |
| Koha item type |
Documentos solicitados |
