Regulation of coconut somatic embryogenesis: decoding the role of long non-coding RNAs (Record no. 55057)

MARC details
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fixed length control field 02215nam a2200277Ia 4500
003 - CONTROL NUMBER IDENTIFIER
control field MX-MdCICY
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20250625162459.0
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Transcribing agency CICY
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Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) B-20978
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Title Regulation of coconut somatic embryogenesis: decoding the role of long non-coding RNAs
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Volume/sequential designation Plant Biotechnology Reports, 18, p.33-44, 2024
520 3# - SUMMARY, ETC.
Summary, etc. Long non-coding RNAs (lncRNAs)are transcripts longer than 200 nucleotides that lack significant protein coding potential and have been shown to regulate various biological processes. This study was designed to identify lncRNAs in coconut and their role in the process of somatic embryogenesis in coconut, a crop with high recalcitrance to in vitro culture. RNA-Seq data of coconut embryogenic calli of the West Coast Tall cultivar was exploited for in silico prediction of lncRNA. From a total of 6328 transcripts, which were annotated as uncharacterised or with no homology hits with the existing database, 5110 putative lncRNAs are identified. We also studied the relationship between lncRNAs, microRNAs (miRNAs)and mRNAs and found that some of the lncRNAs act as miRNA precursors, some as potential miRNA targets and some function as endogenous target mimics (eTMs)for miRNAs. Real-time quantitative PCR confirmed that 10 selected lncRNAs showed significant differences in the expression pattern in different stages of coconut somatic embryogenesis. Our results suggest the existence of diverse lncRNAs in coconut embryogenic calli, some of which are differentially expressed. The information generated in this study could be of great value in understanding the molecular mechanisms governing somatic embryogenesis in coconut.
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Topical term or geographic name entry element COCONUT
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element EMBRYOGENIC CALLI
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element ENDOGENOUS TARGET MIMICS
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element LNCRNA
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element SOMATIC EMBRYOGENESIS
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Sabana, A. A.
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Antony, G.
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Personal name Gangaraj, K. P.
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Grace, T.
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Rajesh, M. K.
856 40 - ELECTRONIC LOCATION AND ACCESS
Uniform Resource Identifier <a href="https://drive.google.com/file/d/1UMQYgAhdF70qvTBljaKVyRPnzloEzzdq/view?usp=drivesdk">https://drive.google.com/file/d/1UMQYgAhdF70qvTBljaKVyRPnzloEzzdq/view?usp=drivesdk</a>
Public note Para ver el documento ingresa a Google con tu cuenta: @cicy.edu.mx
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Source of classification or shelving scheme Clasificación local
Koha item type Documentos solicitados
Holdings
Lost status Source of classification or shelving scheme Damaged status Not for loan Collection Home library Current library Shelving location Date acquired Total checkouts Full call number Date last seen Price effective from Koha item type
  Clasificación local     Ref1 CICY CICY Documento préstamo interbibliotecario 25.06.2025   B-20978 25.06.2025 25.06.2025 Documentos solicitados