The consequences of sample pooling in proteomics: an empirical study. (Record no. 62071)

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fixed length control field 02007nam a2200265Ia 4500
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control field MX-MdCICY
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20251009160712.0
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Transcribing agency CICY
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Classification number (OCLC) (R) ; Classification number, CALL (RLIN) (NR) B-21983
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Title The consequences of sample pooling in proteomics: an empirical study.
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Series statement Electrophoresis, 30(17), 2967-2975, 2009.
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General note Artículo
520 3# - SUMMARY, ETC.
Summary, etc. Pooling of samples in proteomics experiments might help overcome resource constraints when many individuals are analysed. The measured biological variation should be reduced giving increased power to detect treatment differences. Pooling has been advocated in microarray work but there are few tests of its potential in proteomics. In this study, we examine three issues on which the success of the pooling approach might hinge and provide evidence that: (i) the protein expression in a pool matches the mean expression of the individuals making up the pool for the majority of proteins, although for some proteins the pool expression is different; (ii) the biological variance between pools is reduced compared with that between individuals, as predicted in theory, but this reduction is not as large as expected. A practical consequence of this is that power could be reduced; (iii) proteins detectable in individual samples are usually but not always visible when samples are pooled. We conclude that pooling of samples in proteomics work is a valid and potentially valuable procedure but consideration should be given to these issues in experimental design.
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Topical term or geographic name entry element AVERAGING EFFECT
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Topical term or geographic name entry element BIOLOGICAL VARIATION
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Topical term or geographic name entry element DILUTION EFFECT
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element SAMPLE POOLING
650 14 - SUBJECT ADDED ENTRY--TOPICAL TERM
Topical term or geographic name entry element TECHNICAL VARIATION
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Diz, A. P.
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Personal name Truebano, M.
700 12 - ADDED ENTRY--PERSONAL NAME
Personal name Skibinski, D. O.
856 40 - ELECTRONIC LOCATION AND ACCESS
Uniform Resource Identifier <a href="https://drive.google.com/file/d/1Fo0llEAsLMDdt9dFgr3eNzMIsJl37Hs3/view?usp=drive_link">https://drive.google.com/file/d/1Fo0llEAsLMDdt9dFgr3eNzMIsJl37Hs3/view?usp=drive_link</a>
Public note Para ver el documento ingresa a Google con tu cuenta: @cicy.edu.mx
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Source of classification or shelving scheme Clasificación local
Koha item type Documentos solicitados
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  Clasificación local     Ref1 CICY CICY Documento préstamo interbibliotecario 09.10.2025   B-21983 09.10.2025 09.10.2025 Documentos solicitados