TY - BOOK AU - Makarova,K.S. AU - Haft,D.H. AU - Barrangou,R. AU - Brouns,S.J.J. AU - Charpentier,E. AU - Horvath,P. AU - Moineau,S. AU - Moineau,S. AU - Wolf,Y.I. AU - Yakunin,A.F. AU - Van Der Oost,J. AU - Koonin,E.V. TI - Evolution and classification of the CRISPR-Cas systems KW - CELLULAR APOPTOSIS SUSCEPTIBILITY PROTEIN KW - CLUSTERED REGULARLY INTERSPACED SHORT PALINDROMIC REPEATS CRISPR ASSOCIATED PROTEIN KW - UNCLASSIFIED DRUG N2 - The CRISPR-Cas (clustered regularly interspaced short palindromic repeats-CRISPR-associated proteins)modules are adaptive immunity systems that are present in many archaea and bacteria. These defence systems are encoded by operons that have an extraordinarily diverse architecture and a high rate of evolution for both the cas genes and the unique spacer content. Here, we provide an updated analysis of the evolutionary relationships between CRISPR-Cas systems and Cas proteins. Three major types of CRISPR-Cas system are delineated, with a further division into several subtypes and a few chimeric variants. Given the complexity of the genomic architectures and the extremely dynamic evolution of the CRISPR-Cas systems, a unified classification of these systems should be based on multiple criteria. Accordingly, we propose a 'polythetic' classification that integrates the phylogenies of the most common cas genes, the sequence and organization of the CRISPR repeats and the architecture of the CRISPR-cas loci. © 2011 Macmillan Publishers Limited. All rights reserved UR - https://drive.google.com/file/d/1QoGtdaC5srpNJhE8zJi4PJ1SvwGDM7Sl/view?usp=drivesdk ER -