000 03988nam a22005175i 4500
001 978-0-387-37237-2
003 DE-He213
005 20250710083957.0
007 cr nn 008mamaa
008 100301s2007 xxu| s |||| 0|eng d
020 _a9780387372372
_a99780387372372
024 7 _a10.1007/978-0-387-37237-2
_2doi
082 0 4 _a570.285
_223
100 1 _aBal, Harshawardhan.
_eauthor.
245 1 0 _aJava for Bioinformatics and Biomedical Applications
_h[recurso electrónico] /
_cby Harshawardhan Bal, Johnny Hujol.
264 1 _aBoston, MA :
_bSpringer US,
_c2007.
300 _aXVII, 342 p.
_bonline resource.
336 _atext
_btxt
_2rdacontent
337 _acomputer
_bc
_2rdamedia
338 _arecurso en línea
_bcr
_2rdacarrier
347 _atext file
_bPDF
_2rda
505 0 _ato Bioinformatics and Java -- to Basic Local Alignment Search Tool -- Running BLAST using SwingBlast -- Facilitating PubMed Searches: JavaServer Pages and Java Servlets -- Creating a Gene Prediction and BLAST Analysis Pipeline -- cancer Biomedical Informatics Grid (caBIG™).
520 _aJava for Bioinformatics and Biomedical Applications describes the work of the U.S. National Cancer Institute (NCI, National Institutes of Health, U.S. Department of Health and Human Services) and a large number of cancer centers across the U.S. under the caBIG™ (cancer Biomedical Informatics Grid) program, as well as standard bioinformatics applications. The goal of NCI caBIG™ is to create a standards based, interoperable network of individuals, applications and data to enhance the pace of cancer research. CaBIG™ uses J2EE and open source standards for all software development work. This book examines the tools and technologies being developed under caBIG™ to meet the goal of eliminating suffering and death from cancer by 2015 as formulated by the former NCI Director, Dr. Andrew von Eschenbach.In doing so, it provides a vignette into the efforts of thousands of people - molecular biologists, medical practitioners, software developers, to name a few - across the country to bring the promise of translational research to individuals with cancer. From a software perspective, a functional approach is used to teach the Java platform and its features for enterprise-level application development. Under this approach, the various syntactical and operative elements of the language and any software libraries that have been used (for example, BioJava, Apache, etc.) are taught not in isolation but in the context of discrete definable research problems that enable the user to relate how the different parts of the language fit together in the big picture. All examples are derived from practical problems faced in biomedical/clinical data retrieval and analysis during routine bioinformatics and cancer research. Further, the book illustrates how individual bioinformatics applications (such as BLAST and Genscan) can be stitched together into a pipeline so that users can direct the output of one tool (for example, gene predictions using Genscan) to perform further analysis (say, homology searching using BLAST).
650 0 _aLIFE SCIENCES.
650 0 _aONCOLOGY.
650 0 _aMEDICINE.
650 0 _aMEDICAL RECORDS
_xDATA PROCESSING.
650 0 _aPROTEOMICS.
650 0 _aBIOINFORMATICS.
650 0 _aBIOLOGY
_xDATA PROCESSING.
650 1 4 _aLIFE SCIENCES.
650 2 4 _aBIOINFORMATICS.
650 2 4 _aCOMPUTER APPL. IN LIFE SCIENCES.
650 2 4 _aCANCER RESEARCH.
650 2 4 _aPROTEOMICS.
650 2 4 _aMOLECULAR MEDICINE.
650 2 4 _aHEALTH INFORMATICS.
700 1 _aHujol, Johnny.
_eauthor.
710 2 _aSpringerLink (Online service)
773 0 _tSpringer eBooks
776 0 8 _iPrinted edition:
_z9780387372358
856 4 0 _uhttp://dx.doi.org/10.1007/978-0-387-37237-2
_zVer el texto completo en las instalaciones del CICY
912 _aZDB-2-SBL
942 _2ddc
_cER
999 _c57551
_d57551